PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY51848.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | B3 | ||||||||
Protein Properties | Length: 409aa MW: 46985.5 Da PI: 8.5109 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 32.5 | 1.6e-10 | 17 | 91 | 17 | 97 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++p +f+++++ + s tl ++g + +v l r+ ++++++ +GW+eF + +++g f+vF+++g+s f +v +f GAY51848.1 17 RIPENFVRNFKDD--LSAAATLIVPNGMVSRVGL--RRLDNKVWFYDGWQEFMERYFIRVGYFLVFRYEGNSAF--NVYIF 91 69*****988766..8889***************..**********************************9999..88887 PP | |||||||
2 | B3 | 61.9 | 1.1e-19 | 308 | 399 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 vl ps+ k ++++lp fae+h +g+ ++ ++l+ ++g++W v++ yr+++ +++GW eF +n+L egD++vF++ + +ef l+v+vfr GAY51848.1 308 VLRPSYLYKGCIMYLPSCFAEKHlNGV--CG-FIKLQLSDGKQWPVRCLYRGGR--AKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVTVFRV 399 7889*******************8777..44.59999999********666665..5699*********************9988*********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MVNGESGGIH LILTLERIPE NFVRNFKDDL SAAATLIVPN GMVSRVGLRR LDNKVWFYDG 60 WQEFMERYFI RVGYFLVFRY EGNSAFNVYI FNLPSSEINY QPNALSNFEV PNHSKQYHIF 120 AEMEDDDSEH VDQPTVNKTF NPPSFQNLLN SSKLSNSING AGEANLQRLK GLINSLVGNY 180 YTLDIDVQFN IYESKDLLNA VKLYSQDGET PKLKKPGRKR KIDPSKIFGL AFLFNPVMSE 240 EFKFLIKQFY KNADVQASSA QEVHDGEMQF RFYESASARK RTVTAEERER AINAAKAFEP 300 SNPFCRVVLR PSYLYKGCIM YLPSCFAEKH LNGVCGFIKL QLSDGKQWPV RCLYRGGRAK 360 FSQGWYEFTV ENRLGEGDVC VFEVLRAREF VLKVTVFRVS ESAGFMSRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-125 | B3 family protein |