PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51798.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 334aa    MW: 36366.7 Da    PI: 7.875
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.5e-057395123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C +C+k +  +s++k H++t+
  GAY51798.1 73 WVCDKCNKGYAVQSDYKAHLKTC 95
                58*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MLENNINIIA PSSSSDPFSS SENGALAIHN KRKRKPAGTP EPSCLHHDPC HALGDLVGIK  60
KHFRRKHSNH KQWVCDKCNK GYAVQSDYKA HLKTCGTRGH SCDCGRPACS SRTASSTSPS  120
SDANFSIPPA LPGLPLQKPG EPVFLYSSRN NASISDHQQE HNLELQLLPS SSNSNATRTS  180
YENYATHLKL SIGSSDSGGE NSESNKLISL DATACEPSLE AKKLKEFANE QLKLAMAEKA  240
YAEEARQQAK RQIEMAELEF ANAKRIRQQA QSELEKALAL KEQATKKISA TIMQVTCQAC  300
KHQFQASTSM APPCDETSLA MSYMSSATTE GEGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68130.23e-73C2H2 family protein