PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY51645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 207aa MW: 23464.8 Da PI: 7.9269 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 90.8 | 1.9e-28 | 43 | 132 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY YA+++GF vr+ + ++s+++g++ r++ C+k+g++ ++k ++ e+++r++ r gCka++ vk+ek+gkw+vt++ ++HnH+l+ GAY51645.1 43 KFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 132 6**********************************************9****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MELDEGAAAA DSCVIEKSGE LAGDEILEPY VGMEFDSEDA ARKFYMGYAR RMGFVVRIMQ 60 RRRSRTDGTT LARRLGCNKQ GFSPNSKGTN GPEKKPRPSA REGCKATILV KMEKSGKWVV 120 TRFIKDHNHP LVVTANGYST VGDKDKKIEE LTLELERQEQ LCAAYREKLF NFMNNVEEQT 180 EELSSKIQVI VDNIRKVESE MLKSFLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 6e-66 | FAR1 family protein |