PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51644.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 262aa MW: 30135.2 Da PI: 9.7504

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	96.6	2.8e-30	82	169	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + ++ +++r++ra+tr gCka+++vkkek+gkw+vt++++eHnH+l+ GAY51644.1 82 FYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRR-SENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 169 9*****************************************99.9*************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MNTVRNQESS RSSQLKQLRK DLGFSEPETK TSVAVDENPS TGQNEEMMEN VNDQEMAVTK 60 GSLDGEPYLG MEFESEEAAK VFYDAYATHM GFIMRVDAFR RSMRDGKVVW RRLVCNKEGF 120 RKLRPRRSEN RKPRAVTREG CKAMIVVKKE KTGKWVVTRF VKEHNHPLVA IPANGRRSVL 180 LSQTPVAQDT GPSVNYDEKD VKIRELTAEL QRERKRSAAY QEQLEMVLRD MENHSHHLSR 240 NIDDIVQSVK QIEAKRIAAS HC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-89	FAR1 family protein