PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51439.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 346aa    MW: 38104.7 Da    PI: 9.1371
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.8e-1379123147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       GAY51439.1  79 RESWTEQEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 123
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MVSVNPNPAQ GFFFFDPMNM GHPGPNSLPP TGSYNAATTT NDSTTASAST KSTGAINTMS  60
FAEDPSKKIR KPYTITKSRE SWTEQEHDKF LEALQLFDRD WKKIEAFIGS KTVIQIRSHA  120
QKYFLKVQKN GTSEHVPPPR PKRKAAHPYP QKAPKTVHGV SQFGGQVQSS AALLEPGYIY  180
RPDSSSVLGN PVPVAALSSW SYDSVPPVNV SQVTKDDVGL PGSSNAQNFC YSSSNDSTLR  240
TWPVGETIDR GDHGKPRRVM PDFAQVYSFL GSVFDPNSTG HIQRLKQMDP INFETVLLLM  300
RNLAINLTSP EFEDHKRLLS LYDVESERNK FGSLHAGNSE SAIPSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.14e-99MYB_related family protein