PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50469.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 283aa    MW: 30464.3 Da    PI: 10.3667
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73e-14122166347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r++  +Rt+ q+ s+ qky
       GAY50469.1 122 AWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKY 166
                      7*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTS HKAVGGGGGG GSSLRLFGVQ LIDVSSSSPS SSSSSSIAMS  60
LKKSFSMDCL SSAAVPSSSS SNSSSLVSID EDKTAVGYLS DGLIMIPPTS NHQHQERKKG  120
VAWTEEEHRK FLMGLEKLGK GDWRGISRKF VSTRTPTQVA SHAQKYFLRL ASDLNKKKRR  180
SSLFDMIGIR SSMAAVHHRQ VNSSSKQEEQ PIRDESAARL HGLIDSQQQI KPSSNASSSK  240
PSLMPPNNSI LSPSDDDLEL KLATPNSVEE NKSSPKPLLI RVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176180KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.18e-51MYB_related family protein