PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY50410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 28759.9 Da PI: 4.8308 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.9e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+++ +q+G+g +W + +++ g++R++k+c++rw++yl GAY50410.1 14 RGPWSAEEDSILKNYLEQFGNGgNWIALPKKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.2 | 3.3e-12 | 69 | 112 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++ +G++ W+ Ia+ ++ gRt++++k++w++ GAY50410.1 69 GGFTKEEDTIICNLYCTMGTHVWSVIASQLP-GRTDNDVKNYWNT 112 569****************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGRAPCCDKA NVKRGPWSAE EDSILKNYLE QFGNGGNWIA LPKKAGLNRC GKSCRLRWLN 60 YLRPDIKHGG FTKEEDTIIC NLYCTMGTHV WSVIASQLPG RTDNDVKNYW NTKLKKNVLA 120 GKLSDNTQVS VSTIPEEFGN SSYYLSADSA AGAFLPYVSD INCYYHQNHP APQGMIFDPS 180 ANSNYGNKMT STTQEAAAAS SLSISSSSST LENNYDLRSA NGNVEDEGIL LDDFDFEYSY 240 ELLNGFDFEK ASNEVAQCLG G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 9e-68 | MYB family protein |