PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY50099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 323aa MW: 35136.3 Da PI: 10.5499 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.3 | 3.1e-12 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v+++G+g W+tI + R+ ++k++w++ GAY50099.1 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEfsailHSRSNVDLKDKWRN 55 79***********************************9************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MGAPKQKWTA EEEAALKAGV RKHGTGKWRT ILSDPEFSAI LHSRSNVDLK DKWRNINVTA 60 IWGSRQKAKL ALKKTSLTPK LDGRTPVIPK HDGRTPVTPK QDGRTQMTPK HDDNTIALST 120 APQNDEVVDA KPLAISSGTM QASGSKEPVA RLDKLILEAI SNLKEPNGSD RASIASYIED 180 QYWAPANLRK LLATKLKFLS ANGTLIKAKH KYRITPNTPV SVPKRSPKLL LEGRQKGSPK 240 AQKKEINILT KSLVDADLSR MRGMTAQEAA AAAAQAIAEA EVAIAEAEEA AREAERAEAE 300 AEAAQVFAKA AIKALKCRAL HTW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67580.1 | 1e-70 | MYB_related family protein |