PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY50057.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 540aa MW: 60756.4 Da PI: 6.5243

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY50057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.8	6.3e-17	66	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GFs+ + ++ k +g i++ +f Cs+e +++++ ++ C+a l++++++++kw vtk++++HnH+++ GAY50057.1 66 FYDAYARRMGFSTHVGPFTRAKPDGPIITWDFACSREVFKRKNVES--------------CNAVLRIERKDSEKWTVTKFVEDHNHSMV 140 9*************************************999877..............************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MEVEGVEVDG DKGDDPVATN AEFDKSKKQN VTENSSEIEV TNHDNGESSK PYVGMEFDSE 60 DAAKTFYDAY ARRMGFSTHV GPFTRAKPDG PIITWDFACS REVFKRKNVE SCNAVLRIER 120 KDSEKWTVTK FVEDHNHSMV TPNKVQYLRP RRHFAGATKN VAEALDVSGD VYITTDGNHL 180 SYEPNSIRNS LPVDPSQFES SWCSLLDKYD LQKNEWLHAV YNARRQWAPV YFRGTFFAAL 240 SSNQGISSFF DGYVHQQTTI PLFFKQYERA LENSREKEIE LDYDTICTTP VLKTPSPMEQ 300 QAANLYTKKV FAKFQEELVG ALAVETYNVA ISALKEAGKK VLAVKKNVAK ISPPSSQVVL 360 YSQEDSNKKT PPSVPEMIPS LWPWQEAMPH RFNLNDSGVS VSDLNQPSMV PVSFHRDCGT 420 PDSTVVLTCF KSMTWVIENK NSTSASKVAV INLKLQDYGK KPSGETEVQF RLTKTTLEPM 480 LRSMAYISQQ LSAPANKVAV INLKLQDTKT TSGEAEVKFQ VSRDTLGSML RSLAYIREQL

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MEVEGVEVDG DKGDDPVATN AEFDKSKKQN VTENSSEIEV TNHDNGESSK PYVGMEFDSE  60
DAAKTFYDAY ARRMGFSTHV GPFTRAKPDG PIITWDFACS REVFKRKNVE SCNAVLRIER  120
KDSEKWTVTK FVEDHNHSMV TPNKVQYLRP RRHFAGATKN VAEALDVSGD VYITTDGNHL  180
SYEPNSIRNS LPVDPSQFES SWCSLLDKYD LQKNEWLHAV YNARRQWAPV YFRGTFFAAL  240
SSNQGISSFF DGYVHQQTTI PLFFKQYERA LENSREKEIE LDYDTICTTP VLKTPSPMEQ  300
QAANLYTKKV FAKFQEELVG ALAVETYNVA ISALKEAGKK VLAVKKNVAK ISPPSSQVVL  360
YSQEDSNKKT PPSVPEMIPS LWPWQEAMPH RFNLNDSGVS VSDLNQPSMV PVSFHRDCGT  420
PDSTVVLTCF KSMTWVIENK NSTSASKVAV INLKLQDYGK KPSGETEVQF RLTKTTLEPM  480
LRSMAYISQQ LSAPANKVAV INLKLQDTKT TSGEAEVKFQ VSRDTLGSML RSLAYIREQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	5e-74	FAR1 family protein