PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49957.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 269aa    MW: 30379.2 Da    PI: 10.3086
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.89.5e-06175197123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykCp+C+  F ++  +  H+r+H
  GAY49957.1 175 YKCPKCNGAFGTSQAFAAHMRSH 197
                 9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MGINFGPSDL GNRDETLYNG LLLSQNNSNL HQNPLNGNGL ISSHQLNQLL HHQNNQFISQ  60
RIYQPSNIGL NGHLGLGQVV TEVRRTFVTL TPNRVQVHSF IDYSPIQNQL AFPPKEASAY  120
GDRVVTTLAK GKTHVQDKNP GKNPNNVQNP NRKENQDVEY DGRIHSHPCK KYGPYKCPKC  180
NGAFGTSQAF AAHMRSHYKY ETSAERKRRL SARLKKRNLR LVHSTEGLTM MPQPSNEQMR  240
VKARKRNGHG EANTSVEIEV EVEKLLKID
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210ERKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18490.12e-08C2H2 family protein