PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY49953.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GATA | ||||||||
Protein Properties | Length: 259aa MW: 28697.6 Da PI: 6.7054 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.9 | 6.8e-19 | 205 | 241 | 1 | 35 |
GATA 1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ nC+t++Tp+WRrgp g+ktLCnaCG++yrk+++ GAY49953.1 205 CTnyNCKTSDTPMWRRGPLGPKTLCNACGIKYRKEEE 241 55559*****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDSQWFNQAE ATNMNGCDLQ NAGNRIDLTL KLGLPDSSDH ENQHLRHFDQ MTPCHSNLNI 60 DALNSHEGMN MANNNIGQGF NPGEVAWQPS NFTEQYVHSD NNNNNHYGLI PFQGSTSMGS 120 PPLPIYYPHN INSVNNFNIN PNQNVPLAAA APPPPPMNDC TLLDVPPRRD ELEEGSSSAA 180 APARRRATGT RRPRGGSIID PNKRCTNYNC KTSDTPMWRR GPLGPKTLCN ACGIKYRKEE 240 EKRLKAKEAN SQSSNTETD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20750.1 | 2e-14 | GATA family protein |