PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48343.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 372aa    MW: 41194.6 Da    PI: 6.6858
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17258292135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  GAY48343.1 258 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 292
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MEVPEFFQGS YCAQFSAEKH HSLDSNKSSN GGDHFIVEEL LDFSNEDAIL TDAAAFDDVT  60
ANSTDSSTVT VVDSCNSSSF SGCGPNFPGE NNGCRNFSDA HFSGDLCVPY DDLAELEWLS  120
NIVEESFSCE DLQKLQLISG MKARSDHSSE PRQFQPGTNR IYHGSTNTSN NTNANPNNPV  180
FNPEMAVPAK ARSKRSRAAP CSWASRLLVL SPPESTSEPE IIPTGPPPPP LQGKKSVKAC  240
GSKKKDSGDE GNGEGRKCLH CATDKTPQWR TGPMGPKTLC NACGVRYKSG RLVPEYRPAS  300
SPTFVLTKHS NSHRKVLELR RQKELQRAQQ QQHQQQQFMH HHHHHQNMMF DLSNGDDYLI  360
HQHVGPDFRQ LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-75GATA family protein