PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY48024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 470aa MW: 51441.2 Da PI: 6.7875 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.9 | 4.8e-10 | 268 | 316 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq GAY48024.1 268 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 316 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 470 aa Download sequence |
MGAGDNDDMG FQPRNESAMN CSSGMIPQKL PGMQMNSVPM YKSVSGPDHF YGSGWEPIVS 60 LNQGESFGVS SMVSHNEFAP SYPVALENQG MSSTSNLDQY SSDPSFVELV PKIPGFGSGN 120 FSEMVSSFGL PENAQIASSG CPPNYVPNKE GCYERNSRNV SQSYEDHQIC EEAAIVVATN 180 GKTRKRAPES NSLLNTDKNV EVELQKDPSG DSSGILKEQD EKKQKIEQNT GANMRGKQAA 240 KPTKDSSLSG EAPKEYIHMR AKRGQATNSH SLAERVRREK ISERMRLLQE LVPGCNKITG 300 KAVMLDEIIN YVQSLQQQVE FLSMKLATVN PELNLDIERI LSKDILHARS GSAATIGFSS 360 GMNSSRPYPP GIFQGTMPSI PGANPQFPPL PQLLTVWDQM VSGKALEVGA LKFGKIRTFQ 420 VGKIKMFQVL LTENLEVPKP KEEVSRFISA KSVDGCLTIL REKADRSSFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-72 | bHLH family protein |