PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47894.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 163aa    MW: 18003.9 Da    PI: 6.3548
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79.1e-053456123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ Fs+   L  H++ H
  GAY47894.1 34 YTCAFCKRGFSNAQALGGHMNIH 56
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
METNSQASSI EKSSQILWSS DDLDSSDSGH VKSYTCAFCK RGFSNAQALG GHMNIHRKDR  60
AKLRQFSEEN LLSLDIAKAA NPSIEAPNIV SEDRGAVILE SSVQEKICTP KSKEEKMTRQ  120
LGESSSSSSH IDQYLDLELR LGPEPREASA SRITKDLYRS SSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-21C2H2 family protein