PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY47706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 186aa MW: 20182.6 Da PI: 7.0602 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 183.5 | 1.7e-57 | 25 | 120 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr lPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+++re+egek GAY47706.1 25 REQDRSLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 120 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MGDSDNDSGG ERERQHGSSR ELSPREQDRS LPIANVSRIM KKALPANAKI SKDAKETVQE 60 CVSEFISFVT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKVYL QRFREMEGEK 120 MARDKDAPPG HGVGGAIGGE YGGMMMMGHG GQLNQGNVYG SGGFHHQMAM SSKGGPTSGG 180 SLGRPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 4e-70 | NF-YB family protein |