PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY47552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 36153.3 Da PI: 5.6762 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.8 | 3e-19 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll ++++q+G g+W+ +a++ g++Rt+k+c++rw++yl GAY47552.1 28 RGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGLKRTGKSCRLRWLNYL 75 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.3e-16 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E+ l+++++ ++G++ W++Ia++++ gRt++++k++w++ GAY47552.1 81 RGNLTPQEQFLILELHSKWGNR-WSKIAQCLP-GRTDNEIKNYWRT 124 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MHTMRAARAA GTKRECNSSE EDQQELRRGP WTLEEDTLLT HYIHQHGEGR WNMVAKCAGL 60 KRTGKSCRLR WLNYLKPDIK RGNLTPQEQF LILELHSKWG NRWSKIAQCL PGRTDNEIKN 120 YWRTRVQKQA RQLNIESNSE TFFEAVRCYW MPRLLQKMEQ NSASPNTLLT NSSAQSSNFS 180 IIPSVSSSTL SPLPSTILYN SNQTINENSS SETSPNFFPG DFSKISQLQQ PGITQQPTSP 240 HAYGNNVCSN QIVPNDSYYV DCCGFDMEGY SLTDPIAEMS SYDISSSECQ MAEADWMSND 300 MSDALWNMDD IWQLRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 2e-92 | MYB family protein |