PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47551.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 242aa    MW: 26942.3 Da    PI: 6.8749
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.5e-08135182455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR+riN+++  L++l+P +     k +  a +L   ++Y++sLq
  GAY47551.1 135 SHSLAERVRRERINERLRCLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 182
                 8*************************8....355888888999999988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MALENRNTSD DQPAGVMGFF SNGSFFDHHQ QPQLCMSFAD NNIQSEALVV PSIGLIADFS  60
HDTSNGKKAA AHSVESFMNL SPTPASGSGF LSVNNKGTGM QGLSGRKRKR NNERVVEKPK  120
EVIHVRAKRG QATDSHSLAE RVRRERINER LRCLQDLVPG CYKTMGMAVM LDVIINYVRS  180
LQNQIEFLSM KLSAASMYYD FNSELDTTET MPGTNECDAQ DMERMVREGY GGPSYFHSAW  240
SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.14e-47bHLH family protein