PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47386.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Dof
Protein Properties Length: 310aa    MW: 34148.2 Da    PI: 7.055
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.22.4e-4052112262
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  GAY47386.1  52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 112
                 6899******************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MMGLTSLQVC MDSSDWLQGS IHEESGLDSS SPSGDMLTCS RPLMERRLRP PHDQALKCPR  60
CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK VSSKKSNDQS  120
MNQNPGSSSH NPTDLQLSFP EMQFSHLGNI LGAHGTLANN HNFMDNKYSA MLENPRPIDF  180
MENKLEAIVG SSRNYDFMGN NGDMGMVGGL GNLSHHHQEG LTPNVHNLCS PFGMSLDGTG  240
GTFIDGCQRI MLPYDANEVQ NAIDVKPNAK LLSLDWQDQS CSDVGYLGNL GSSWSGMMNG  300
YGSSTTNSLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.13e-65Dof family protein