PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47128.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YA

Protein Properties

Length: 369aa MW: 39582.4 Da PI: 8.1501

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	102	5.8e-32	196	252	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy +Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+RgsgGrF GAY47128.1 196 QEPVYVNAKQYMGILRRRQARAKAELEKKL-IKVRKPYLHESRHQHAMRRARGSGGRF 252 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MRSKSERTNQ LEPDPNAIPP GAAYTEPWWR GVGYNSISPA LAGANVSNSS SLDCPNGSES 60 NDAKSISNDG LNEEDDDANK ESQATASSRS VCACISDLGA GNHGQKNQNV QQGASAMPTI 120 RDECFTQPPQ LELVGHSIVK GTPSFLATFW QACASNPYQD PYYGGMMAAY GHQPVGYPQF 180 VGMPHARMPL PLEMAQEPVY VNAKQYMGIL RRRQARAKAE LEKKLIKVRK PYLHESRHQH 240 AMRRARGSGG RFAKKTDDAS KGNSEKKGGG SGIRPSLSGS SSGSEPVPSD SAETWNSSAS 300 QQDVGGSQAH NMHEARNHAN ANGGYQNHGL QASTYHSHLG DRGETGDCSG KQWGSISSNQ 360 ASQRPLAIQ

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MRSKSERTNQ LEPDPNAIPP GAAYTEPWWR GVGYNSISPA LAGANVSNSS SLDCPNGSES  60
NDAKSISNDG LNEEDDDANK ESQATASSRS VCACISDLGA GNHGQKNQNV QQGASAMPTI  120
RDECFTQPPQ LELVGHSIVK GTPSFLATFW QACASNPYQD PYYGGMMAAY GHQPVGYPQF  180
VGMPHARMPL PLEMAQEPVY VNAKQYMGIL RRRQARAKAE LEKKLIKVRK PYLHESRHQH  240
AMRRARGSGG RFAKKTDDAS KGNSEKKGGG SGIRPSLSGS SSGSEPVPSD SAETWNSSAS  300
QQDVGGSQAH NMHEARNHAN ANGGYQNHGL QASTYHSHLG DRGETGDCSG KQWGSISSNQ  360
ASQRPLAIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12840.1	2e-82	NF-YA family protein