PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY46481.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GATA | ||||||||
Protein Properties | Length: 341aa MW: 37447 Da PI: 6.7112 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.1 | 1e-17 | 245 | 278 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C tkTp+WR gp g+ktLCnaCG++y++ + GAY46481.1 245 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 278 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MIGTNFMDEI DCGSFFDHID DLLDFPNEDV EAGLPNADSN SFPSIWPTQS DSLPGSDSVF 60 SNSSTDLSTQ LSVPYEDIVQ LEWLSNFVED SFSGGSLTMS KQESSTITKD DSSHNQFQTS 120 SPVSVLESSS SCSGEKTVLG SPETTAPGRR GRARSKRPRP ATFNPRPPVQ LVSPTSSVTE 180 TQPQHRLIAP KASSDSENFA ESRLVIKIPK QFNPEHKKKK KIKLSVPKVS DETSEVGPTQ 240 AVRKCMHCEI TKTPQWRAGP MGPKTLCNAC GVRYKSGRLF PEYRPAASPT FVPSLHSNSH 300 KKVVEMRNKN CQKPIVAGTE TMMTDAPELI PNNNHLALEY V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 160 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 1e-48 | GATA family protein |