PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY46480.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 341aa    MW: 37447 Da    PI: 6.7112
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY46480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17245278134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  GAY46480.1 245 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 278
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MIGTNFMDEI DCGSFFDHID DLLDFPNEDV EAGLPNADSN SFPSIWPTQS DSLPGSDSVF  60
SNSSTDLSTQ LSVPYEDIVQ LEWLSNFVED SFSGGSLTMS KQESSTITKD DSSHNQFQTS  120
SPVSVLESSS SCSGEKTVLG SPETTAPGRR GRARSKRPRP ATFNPRPPVQ LVSPTSSVTE  180
TQPQHRLIAP KASSDSENFA ESRLVIKIPK QFNPEHKKKK KIKLSVPKVS DETSEVGPTQ  240
AVRKCMHCEI TKTPQWRAGP MGPKTLCNAC GVRYKSGRLF PEYRPAASPT FVPSLHSNSH  300
KKVVEMRNKN CQKPIVAGTE TMMTDAPELI PNNNHLALEY V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156160KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-48GATA family protein