PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY46289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 263aa MW: 30180.9 Da PI: 9.1142 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.7 | 3.1e-19 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll + v++lG g+W+++ar g++R++k+c++rw +yl GAY46289.1 17 KGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ GAY46289.1 70 RGQLTPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 114 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MMRMMGWGAT TEQGWRKGPW TPEEDKLLTE HVNLLGEGRW SSVARSAGLN RSGKSCRLRW 60 VNYLRPGLKR GQLTPQEEGI IIELHALWGN KWSTIARYLP GRTDNEIKNY WRTHFKKEKS 120 SQKQEKRKAL LLKQKQQQQK QQQQHEDNMN RVSSNDEKTM STAEHEKQMA FMQPAMAMEN 180 QSWPTMYQDI ASWPSDHHQP AVIDELGLWG GLWTFDDTNG RVDASTNCNK MAAAVQQNQA 240 ATFALGGDSS NFCNGGYIFQ EGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30210.1 | 3e-68 | MYB family protein |