PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46279.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 404aa MW: 46905.4 Da PI: 8.3978

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8e-07	68	89	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ + +Lk+H+ +H GAY46279.1 68 TCEECGASFKKPAYLKQHMLSH 89 7*******************99 PP
2	zf-C2H2	17.6	1e-05	127	151	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ dC+ s++rk++L+rH+ +H GAY46279.1 127 FRCSadDCHASYRRKDHLTRHLLRH 151 89*********************99 PP
3	zf-C2H2	15	7e-05	156	181	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F+ + n+krH + H GAY46279.1 156 FKCPieNCNREFTIQGNMKRHVKElH 181 89********************9986 PP
4	zf-C2H2	18	8e-06	196	220	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cgk+F+ s L++H +H GAY46279.1 196 YICQeiGCGKVFKYASKLRQHEDSH 220 89*******************9888 PP
5	zf-C2H2	15.2	6.1e-05	301	325	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C sFs++snL++H + H GAY46279.1 301 KCQfkGCLLSFSTNSNLRQHVKAvH 325 688889**************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MEEVSDMEEE KGLEERPKSR DVRRYYCDYC GICRSKKSLI LSHIASHHKE DEERVDGDGE 60 TKGVQCNTCE ECGASFKKPA YLKQHMLSHL LEVGRPPEKL HQVSLIHAIF RIEWITADSF 120 DLLQRPFRCS ADDCHASYRR KDHLTRHLLR HQGKLFKCPI ENCNREFTIQ GNMKRHVKEL 180 HHEGTTSTDS GDQKQYICQE IGCGKVFKYA SKLRQHEDSH VGSLQALTNM FVSTVNLDSV 240 EAFCSEPGCM KYFTNKQCLE AHIRSCHQYI PCEICGSMQL KKNIKRHVRT HEARDLSERI 300 KCQFKGCLLS FSTNSNLRQH VKAVHYEIKP FACSFFGCGM RFAFKHVRDN HEKSGHHGDF 360 VESDERFRSR ERGGRKRKCP TVEMLIRKRV SLPSPTQSCN LYED

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MEEVSDMEEE KGLEERPKSR DVRRYYCDYC GICRSKKSLI LSHIASHHKE DEERVDGDGE  60
TKGVQCNTCE ECGASFKKPA YLKQHMLSHL LEVGRPPEKL HQVSLIHAIF RIEWITADSF  120
DLLQRPFRCS ADDCHASYRR KDHLTRHLLR HQGKLFKCPI ENCNREFTIQ GNMKRHVKEL  180
HHEGTTSTDS GDQKQYICQE IGCGKVFKYA SKLRQHEDSH VGSLQALTNM FVSTVNLDSV  240
EAFCSEPGCM KYFTNKQCLE AHIRSCHQYI PCEICGSMQL KKNIKRHVRT HEARDLSERI  300
KCQFKGCLLS FSTNSNLRQH VKAVHYEIKP FACSFFGCGM RFAFKHVRDN HEKSGHHGDF  360
VESDERFRSR ERGGRKRKCP TVEMLIRKRV SLPSPTQSCN LYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	3e-97	C2H2 family protein