PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46181.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 273aa MW: 30251.6 Da PI: 6.8529

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	104.1	1.3e-32	79	170	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ +++eHnHel+p GAY46181.1 79 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVKEHNHELVP 170 **************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MDSEVLEFDI GLGGGSSGRD GDEDAMDISH HVDEEDMVDS PLPVTWGGSG EIYLPEGDLL 60 DLEPYEGMEF ESEEAAKAFY NSYARRVGFS TRVSSSRRSR RDGAIIQRQF VCAKEGFRNL 120 NEKRTKDREI KRPRTITRVG CKASLSVKMQ DSGKWVVSGF VKEHNHELVP PDQVHCLRSH 180 RQISVRYNTL RHEAFKFVDQ GAKSLDCYNV AVDALQEAAK KVAVAAKNDG KTTMGNGRIR 240 GNSASDANRA NSVSGNHHAS SNQHLSEVRA SFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-75	FAR1 family protein