PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46137.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Nin-like

Protein Properties

Length: 945aa MW: 104537 Da PI: 6.3947

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	5.9e-29	625	675	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ GAY46137.1 625 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 675 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MDDGNFTPNP SFGAFPGTAM DLDFMDELLF DGCWLETTDA LDFLQPGPSS SGPADDTSRY 60 LPYSEGTTGH LSMNLNPQQQ VYQEETKNKF TENPSLVYPK IEEIQDTRTQ DHQGFDPATS 120 SGQSGSFLAQ GNELGRRWWI GPRENTGHSS SVKDRLMQAI IYLKDYIKDG KALVQIWVPI 180 NSGGKQLLTT DDQPYSLDPN SKSLESYRNV STTYHFAADE DSKEFVGLPG RVFREQSPEW 240 TPDVLFFRSE EYPRVNHAQQ YDVHGSLALP VFERGSGACL GVVEVVTTSR KINYRLDLEN 300 VCKALEAVDL RSSGNFSTSC VKARNELYHA AMPEIAEVLR SVCKTHKLPL ALTWAPCVQG 360 RKVECQQSDE NFPHCFLTVD SACFVANENL SGFFVACSEQ QLLQGQGIVG KAFSLSKQCF 420 TADITAFSKS NYPLSHLARM FGLRAAVAIP LRSITTGVVE FILEFFLPRE CQDIEEQKQM 480 VKSLSVAMQQ VCQSLRLAME KELEVVILPV GEMAVTSDGS SPSKETSQEQ SSWISHMIEA 540 QQKGKGVSVS WDHQEEPKEE FKMTTHWDDA RAESFHKQVF PGFGQFQHNS GAKSSVEGGG 600 DSSSLGGHLS VGSRKAGEKR RTKTEKTISL QVLRQYFAGS LKDAAKSIGV CPTTLKRICR 660 QHGITRWPSR KIKKVGHSLR KLQLVIDSVQ GAEGAIQIGS FYTTFPDLNS PIFSGSGTFS 720 SMKINDHPEP SNAPPANGLF STGAAVSKSP SSSCSQSSGS SNCCSTGAKL NTTNINALSS 780 VDTKMVEDPG GMLKRARSDA ELHALNQEEP KLLARSRSHK ILGEHVSLES LPPLPKCGNH 840 NLRDGSTFRV KASFGEEKIR FSLQPNWGFK DLQQEIARRF NIEDFNEIDL KYLDDDHEWV 900 LLTCDADLEE CIDIYKSSQS HTIKISLHRA SHLKLVKVAH NNAPS

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MDDGNFTPNP SFGAFPGTAM DLDFMDELLF DGCWLETTDA LDFLQPGPSS SGPADDTSRY  60
LPYSEGTTGH LSMNLNPQQQ VYQEETKNKF TENPSLVYPK IEEIQDTRTQ DHQGFDPATS  120
SGQSGSFLAQ GNELGRRWWI GPRENTGHSS SVKDRLMQAI IYLKDYIKDG KALVQIWVPI  180
NSGGKQLLTT DDQPYSLDPN SKSLESYRNV STTYHFAADE DSKEFVGLPG RVFREQSPEW  240
TPDVLFFRSE EYPRVNHAQQ YDVHGSLALP VFERGSGACL GVVEVVTTSR KINYRLDLEN  300
VCKALEAVDL RSSGNFSTSC VKARNELYHA AMPEIAEVLR SVCKTHKLPL ALTWAPCVQG  360
RKVECQQSDE NFPHCFLTVD SACFVANENL SGFFVACSEQ QLLQGQGIVG KAFSLSKQCF  420
TADITAFSKS NYPLSHLARM FGLRAAVAIP LRSITTGVVE FILEFFLPRE CQDIEEQKQM  480
VKSLSVAMQQ VCQSLRLAME KELEVVILPV GEMAVTSDGS SPSKETSQEQ SSWISHMIEA  540
QQKGKGVSVS WDHQEEPKEE FKMTTHWDDA RAESFHKQVF PGFGQFQHNS GAKSSVEGGG  600
DSSSLGGHLS VGSRKAGEKR RTKTEKTISL QVLRQYFAGS LKDAAKSIGV CPTTLKRICR  660
QHGITRWPSR KIKKVGHSLR KLQLVIDSVQ GAEGAIQIGS FYTTFPDLNS PIFSGSGTFS  720
SMKINDHPEP SNAPPANGLF STGAAVSKSP SSSCSQSSGS SNCCSTGAKL NTTNINALSS  780
VDTKMVEDPG GMLKRARSDA ELHALNQEEP KLLARSRSHK ILGEHVSLES LPPLPKCGNH  840
NLRDGSTFRV KASFGEEKIR FSLQPNWGFK DLQQEIARRF NIEDFNEIDL KYLDDDHEWV  900
LLTCDADLEE CIDIYKSSQS HTIKISLHRA SHLKLVKVAH NNAPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein