PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY45916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 450aa MW: 50650 Da PI: 6.0537 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.2 | 1.2e-07 | 397 | 429 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + GAY45916.1 397 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 429 69*****************************87 PP | |||||||
2 | ELK | 28.7 | 3e-10 | 350 | 371 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ GAY45916.1 350 ELKHELKQGYKEKIVDIREEIL 371 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 450 aa Download sequence |
MFYDVESTLQ ASRTTTILPD LPLHHFTDQQ QQQQQQPPSP PQQQHHQHQQ SIETTAPNWL 60 NSALLRSQQA QQQAAHFSDT NFLNLRTTAN NNNSNNNNTA SDSDASQTPN QWLSRTSSSL 120 LHRNHSDVID DVTPANDSII AAVESADLKN ANSENMNNAS TNNKSEGVVV ESGADGVVNW 180 QNARYKAEIL SHPLYEQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVS KYSALGAGQG 240 LVTDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWEIEQSLQS LTGVSPGEGT 300 GATMSDDDED QVDSDANLFD GSLEGPDTMG FGPLIPTESE RSLMERVRQE LKHELKQGYK 360 EKIVDIREEI LRKRRAGKLP GDTTSVLKSW WQSHSKWPYP TEEDKARLVQ ETGLQLKQIN 420 NWFINQRKRN WHSNPSTSTV LKSKRKRYSK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 427 | 447 | RKRNWHSNPSTSTVLKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25220.2 | 0.0 | TALE family protein |