PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45745.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 364aa MW: 40161.9 Da PI: 9.0867

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.3e-39	101	160	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s GAY45745.1 101 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 160 6899******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MYVYLYRSLL NKKPRKVRAE LIISCCRQNS KEVNSLFLSL SEVITCFSSI NFCSSQFMDA 60 AKWPQNFPEV GGVKAMEEVV SNTCNSSSSS RPPMLERKAR PQEQLNCPRC NSTNTKFCYY 120 NNYSLTQPRY FCKTCRRYWT EGGSLRNVPV GGGSRKNKRS ISSSAAAASS SNNNNNNNYN 180 KLIIPDLNPP SLSHFSSHEN PKILKGGQDL NLGFQVMHNN ANDMSQYADH PAVASKAETN 240 TTSNDNINNN MSPVSALDLL RTGIASRAGL DHFIPTPMPD SNTLFSSGFP LQDIKPAATL 300 SFSIDQANRF GIQDNIGNGS RLFFPFGELK QLSSASTTEV DHHSNKGTST STGYWNGMFG 360 GGSW

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MYVYLYRSLL NKKPRKVRAE LIISCCRQNS KEVNSLFLSL SEVITCFSSI NFCSSQFMDA  60
AKWPQNFPEV GGVKAMEEVV SNTCNSSSSS RPPMLERKAR PQEQLNCPRC NSTNTKFCYY  120
NNYSLTQPRY FCKTCRRYWT EGGSLRNVPV GGGSRKNKRS ISSSAAAASS SNNNNNNNYN  180
KLIIPDLNPP SLSHFSSHEN PKILKGGQDL NLGFQVMHNN ANDMSQYADH PAVASKAETN  240
TTSNDNINNN MSPVSALDLL RTGIASRAGL DHFIPTPMPD SNTLFSSGFP LQDIKPAATL  300
SFSIDQANRF GIQDNIGNGS RLFFPFGELK QLSSASTTEV DHHSNKGTST STGYWNGMFG  360
GGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	1e-65	Dof family protein