PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY45406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 171aa MW: 19239.2 Da PI: 5.0436 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 85.5 | 6.1e-27 | 32 | 80 | 1 | 49 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtse 49 vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tse GAY45406.1 32 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSE 80 69*********************************************99 PP | |||||||
2 | NF-YB | 83.4 | 2.9e-26 | 111 | 160 | 44 | 93 |
NF-YB 44 sfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 sf+++ asdkcq+ekrktingddllwa+atlGfedy++plk+yl++yre+ GAY45406.1 111 SFLSCRASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREV 160 9***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
GFYWSEMAEA PTSPAGGSHE SGGEQSPHAG GVREQDRYLP IANISRIMKK ALPANGKIAK 60 DAKDTVQECV SEFISFITSE YELAFVLWNV VCLFAVVLLE DLIRFLEIGF SFLSCRASDK 120 CQKEKRKTIN GDDLLWAMAT LGFEDYIDPL KAYLMRYREV RFLSLLAPPF L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 4e-61 | NF-YB family protein |