PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45120.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Dof
Protein Properties Length: 364aa    MW: 38360.4 Da    PI: 9.0574
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.95.2e-3975134362
      zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  GAY45120.1  75 EAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 134
                 7789*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MVFSSIPAYL DPANWQQQPN PQTGASTGVS TQFVQPQAPP PPPPQPHGSG GGGAGSIRPG  60
SMADRARMAN VPMPEAALKC PRCESTNTKF CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN  120
VPVGGGCRRN KRSKGGSSGS SKSPVNSTDR QTASGNNSTS TMSCNNSGGA SDILGLGPQI  180
PQLRFMTPNL HHFTSEFPSG DIGLNYGSLT APPVANELNF GGSLLSSLSG LDQWRLQQQA  240
HHHQQFPFLG GLDSSSSSPS GLYPFEGGVE ASGYGVGGSA GQIRPKISST GIVSQLAAAA  300
APVKMEESSH HHHHQQQEIN LSRQFLGMQG NEHQYWSSTT AAGAAAAGWT DLSSFSSSST  360
SNPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.16e-42Dof family protein