PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45069.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 956aa MW: 103626 Da PI: 6.363

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.4	1.9e-15	513	551	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk++Clk+YC+Cfaag +C+e+C C++C+N+ e GAY45069.1 513 CKRCNCKKTRCLKLYCDCFAAGIYCAESCACQGCFNRPE 551 79**********************************876 PP
2	TCR	48.1	2.3e-15	595	633	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a + Cs+ C+Ce+CkN GAY45069.1 595 RHKRGCNCKKSMCLKKYCECYQAYVGCSSGCRCENCKNV 633 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 956 aa Download sequence
MDSPEPTTAA VKTPASVAAS AAATNITASS SSSPPVQESP FSNFLNNLSP IKPVSGPHEL 60 QGFLGLNSPL AFTSPQINAL RETSSCKRPP CQQLPTAEMS ENDDGVRKFS ADLGNVEKSD 120 SLLQSGLIVN SQKDNDVRSS VQVQPSGSSG CVDEYLADAV DVDCAHSEHG VSISSKQSFD 180 VLQSSVSGRT DSKKALLKFD DKNDAVSNVD VAVAMIGKAE ESIQGKLTCD IEPNEYPKME 240 SNSSSNHASE KQQSENTSAQ NAGSGRGDES DCPSQSLREP LQTIQTYEDF RENAGAILYG 300 PHDNSMHDPE AGKHQRGMSR RCLQFEEAQL KVTVCSSNPS NKLNDVTSSQ LPTTPVESES 360 PDPSHVDLNI TSGKRQLASL PHPVTPVFPP HHTGKSPLTV SKPSGIGLHL NNLIKSSPEG 420 HGAPVGVNLS STEAGMLESK ASIAASSLIS ESFDDMGPLN WPPPVDPNGT PLTMRKFNSE 480 HADNFEEISQ LSPKKKRQVY MKKSSSTVDS DGCKRCNCKK TRCLKLYCDC FAAGIYCAES 540 CACQGCFNRP EYEDTVLETR QQIESRNPLA FAPKIIPRVT EFPDDGNRFT PSSSRHKRGC 600 NCKKSMCLKK YCECYQAYVG CSSGCRCENC KNVYGRKEEY VGNEEMVNSR AIPEGVSDSK 660 PERVTNKNEF LHAELYDLRN LTPLTPSFQF SDHGKDASKS RILSGRYVPS PKSDLTILSS 720 YVKSSRTLNS SDSNEMLLEK SREIVDVDPY GQERDYSSAD MVEQFSPRCH SLADLCDFNP 780 LLDFPSTAME SSASSKATGW TNVSRLQLCP RSGSLLSGSS LRWRSSPVTP LTQLGGTKSL 840 QALDSDGRLS GILGDDTPEV LKDASTPIKS VKVSSPSRKR VSPPHGRAHE HGSSSSSMLK 900 SGRKFILKAV PSFPPLTPCI DSKGSTGQKS FPHLNPCTDS EESTDQERSN FQENKQ

Sequence ? help Back to Top

Protein Sequence Length: 956 aa Download sequence

MDSPEPTTAA VKTPASVAAS AAATNITASS SSSPPVQESP FSNFLNNLSP IKPVSGPHEL  60
QGFLGLNSPL AFTSPQINAL RETSSCKRPP CQQLPTAEMS ENDDGVRKFS ADLGNVEKSD  120
SLLQSGLIVN SQKDNDVRSS VQVQPSGSSG CVDEYLADAV DVDCAHSEHG VSISSKQSFD  180
VLQSSVSGRT DSKKALLKFD DKNDAVSNVD VAVAMIGKAE ESIQGKLTCD IEPNEYPKME  240
SNSSSNHASE KQQSENTSAQ NAGSGRGDES DCPSQSLREP LQTIQTYEDF RENAGAILYG  300
PHDNSMHDPE AGKHQRGMSR RCLQFEEAQL KVTVCSSNPS NKLNDVTSSQ LPTTPVESES  360
PDPSHVDLNI TSGKRQLASL PHPVTPVFPP HHTGKSPLTV SKPSGIGLHL NNLIKSSPEG  420
HGAPVGVNLS STEAGMLESK ASIAASSLIS ESFDDMGPLN WPPPVDPNGT PLTMRKFNSE  480
HADNFEEISQ LSPKKKRQVY MKKSSSTVDS DGCKRCNCKK TRCLKLYCDC FAAGIYCAES  540
CACQGCFNRP EYEDTVLETR QQIESRNPLA FAPKIIPRVT EFPDDGNRFT PSSSRHKRGC  600
NCKKSMCLKK YCECYQAYVG CSSGCRCENC KNVYGRKEEY VGNEEMVNSR AIPEGVSDSK  660
PERVTNKNEF LHAELYDLRN LTPLTPSFQF SDHGKDASKS RILSGRYVPS PKSDLTILSS  720
YVKSSRTLNS SDSNEMLLEK SREIVDVDPY GQERDYSSAD MVEQFSPRCH SLADLCDFNP  780
LLDFPSTAME SSASSKATGW TNVSRLQLCP RSGSLLSGSS LRWRSSPVTP LTQLGGTKSL  840
QALDSDGRLS GILGDDTPEV LKDASTPIKS VKVSSPSRKR VSPPHGRAHE HGSSSSSMLK  900
SGRKFILKAV PSFPPLTPCI DSKGSTGQKS FPHLNPCTDS EESTDQERSN FQENKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-58	CPP family protein