PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44696.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 549aa MW: 60702.3 Da PI: 7.9448

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	30.4	7.8e-10	231	277	3	40
TCR 3 kkgCnCkkskClkk.........YCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+ YCeCfaag +C e C C dC+Nk GAY44696.1 231 CKRCNCKRSKCLKLvlanmrlysYCECFAAGLYCIEPCLCLDCFNKP 277 89*********5555555556********************96 PP
2	TCR	32.6	1.6e-10	324	345	1	22
TCR 1 kekkgCnCkkskClkkYCeCfa 22 ++kkgCnCk+s+ClkkYCeCf+ GAY44696.1 324 RHKKGCNCKRSSCLKKYCECFQ 345 589******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MVTGSRSCSC KQSKMTEPLT QPEEIGDLKD TDQTPDILSS TLLDKLIVSD LREKMDNEEE 60 KCGQSSCKHN ILRRCLDFEM VGAHKKKVAC ESNCTSSNLS QADCKDASTE KHFVPSKSKS 120 SSSSMVAGAG LHLNALAAAS KDGKLVKCKT TASGSKVISM RICESSSLSL TSCPNLLNKS 180 EERDPVPCST EVYVVENAMQ PSVSVCSEEF NHSSPKRKRC KPEHNVESMA CKRCNCKRSK 240 CLKLVLANMR LYSYCECFAA GLYCIEPCLC LDCFNKPIHE DKVLETRRQI ELRNPLAFAP 300 KVIRSIDSTV ELGDEANKTP ASARHKKGCN CKRSSCLKKY CECFQVVFYL GIISIFCVYD 360 TKSCLCIKGG VGCSISCRCE GCKNSFGRKD VPNFAVFSPL GAEEGEYDGE ESETFAKSES 420 DANIHDNTVK EDEEEHPHHL LPSSDISRHE CYGSSPLAVE PLKVCTSPKT SKFFDQPKIE 480 EPLRPTVGEK PPKIHSFLET SSLIPVSPNS KRVSPPHHVI RSSTPRYRSR RSTLRSALSF 540 PSVTPPREH

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MVTGSRSCSC KQSKMTEPLT QPEEIGDLKD TDQTPDILSS TLLDKLIVSD LREKMDNEEE  60
KCGQSSCKHN ILRRCLDFEM VGAHKKKVAC ESNCTSSNLS QADCKDASTE KHFVPSKSKS  120
SSSSMVAGAG LHLNALAAAS KDGKLVKCKT TASGSKVISM RICESSSLSL TSCPNLLNKS  180
EERDPVPCST EVYVVENAMQ PSVSVCSEEF NHSSPKRKRC KPEHNVESMA CKRCNCKRSK  240
CLKLVLANMR LYSYCECFAA GLYCIEPCLC LDCFNKPIHE DKVLETRRQI ELRNPLAFAP  300
KVIRSIDSTV ELGDEANKTP ASARHKKGCN CKRSSCLKKY CECFQVVFYL GIISIFCVYD  360
TKSCLCIKGG VGCSISCRCE GCKNSFGRKD VPNFAVFSPL GAEEGEYDGE ESETFAKSES  420
DANIHDNTVK EDEEEHPHHL LPSSDISRHE CYGSSPLAVE PLKVCTSPKT SKFFDQPKIE  480
EPLRPTVGEK PPKIHSFLET SSLIPVSPNS KRVSPPHHVI RSSTPRYRSR RSTLRSALSF  540
PSVTPPREH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	222	PKRKRCKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	7e-73	CPP family protein