PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44621.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 346aa MW: 37252.2 Da PI: 8.1251

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.3	5.2e-16	141	196	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l +++++ + GAY44621.1 141 AKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEA 196 79*****************************************9999999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MDRVFSVGEI SEQFWSNPPD ASSKMNRSES DKLNLACAAV ALSRASCARP QDTADRADSG 60 SQSSNTSQLG SQAPKGPVHD LSRSQNKDAN GLHGIPSIST TLKKPLVPVR SATSGSSRDL 120 SEDDEAEGET ATTENMDPVD AKRVRRMLSN RESARRSRRR KQAHLTELET QVSQLRVENS 180 SLLKRLTDIS QKYNEAAVDN RVLKADVETL RAKVKMAEET VKRITGLNPL LQGSPEMSSM 240 SMSSFGGSHS DTSADATVPL QDDPKHHFFQ PPSDNPVSSH DLRVNNALSD ISSVENVQPN 300 AGATAAASGN KIGRTVSLQR VASLEHLQKR IRGGVSPCGP NSSGEQ

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MDRVFSVGEI SEQFWSNPPD ASSKMNRSES DKLNLACAAV ALSRASCARP QDTADRADSG  60
SQSSNTSQLG SQAPKGPVHD LSRSQNKDAN GLHGIPSIST TLKKPLVPVR SATSGSSRDL  120
SEDDEAEGET ATTENMDPVD AKRVRRMLSN RESARRSRRR KQAHLTELET QVSQLRVENS  180
SLLKRLTDIS QKYNEAAVDN RVLKADVETL RAKVKMAEET VKRITGLNPL LQGSPEMSSM  240
SMSSFGGSHS DTSADATVPL QDDPKHHFFQ PPSDNPVSSH DLRVNNALSD ISSVENVQPN  300
AGATAAASGN KIGRTVSLQR VASLEHLQKR IRGGVSPCGP NSSGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	162	RRSRRRKQ
2	157	162	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	6e-51	bZIP family protein