PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44490.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 410aa    MW: 46506.3 Da    PI: 6.073
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.3e-056791123
                EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirt..H 23
                y+C+ Cgk ++++  L +H+++  H
  GAY44490.1 67 YSCGLCGKGYRSSKALAQHLNSrsH 91
                99******************98666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MPGLTCNSCN REFNDDAEQK LHYKSDWHRY NLKRKVAGVP GVTEALFLAR QAALAQEKNK  60
NATPMTYSCG LCGKGYRSSK ALAQHLNSRS HIMRASQGTS NEEKEKVIIK PIPLRDVNKP  120
PRKREANNEE SEDSDDEWEE VGPDEVLVSE ATNSLTNLNV GSPADDDLEE DDDDGAFEEF  180
DPACCFMCDL PHDAIENCMV HMHKCHGFFI PDVEYLKDPK GLLTYLGLKV KRDFMCLYCN  240
DRCHPFNSLE AVRKHMEAKR HCKIHFGDGD DEEEAELEEF YDYSSSYMDE DGKQLISSSD  300
MANTVELGGG SELIITKRTD KGTSTKTFGS REYLRYYRQK PRPSPANNVA ITAALASRYK  360
SMGLATVQTR EHMVRMKVIK EMNRTGVEAM RTRVGMKNNI IRNLPKNVPY