PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44307.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 270aa    MW: 29872.6 Da    PI: 7.242
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002289111123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  GAY44307.1  89 FSCNYCQRKFYSSQALGGHQNAH 111
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MESLSKDPSP SEASSIISTP EENKVGDHEE EAKATLSFDL NLDRSDSDDQ GFNQELNLID  60
SLNNTGSSSQ ISSETPHATN DHPSEQRVFS CNYCQRKFYS SQALGGHQNA HKRERTLAKR  120
GQRIGTYTAA SPFAFGQPYL HQNHYSSISS LPLHGAAYNR SLGIQVHSMI HKPSHTSTSH  180
GNGNIYGHNN WSRPPIEQQP AIGRLSSMEN YYSTAAAATS SRRFSLVRNM MGSSSQVDHG  240
ATRNYWWENG GGGLKNNQEE MKKLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.12e-55C2H2 family protein