PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | SBP | ||||||||
Protein Properties | Length: 529aa MW: 59641.2 Da PI: 8.4293 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.4 | 7.3e-42 | 203 | 278 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvC+vhsk+p+v+v+g eqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+q GAY44241.1 203 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ 278 **************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
MCHQMLSRHF HIAYFEQLRY CFKMESWIYG SEGKGILYSD EVDSSVDPFT RSRKTLMAWE 60 SKPSYNFDIN KLFSDSDDVE NMEFMDLCFT DLTRKPCHSN SSLGTPNGEV GSDTNERLTT 120 TPCMVTSNSF CGAESGSKIS SSCMKSISQD SALIDLKLGR LVDGRDKQCG KLFKERSVAS 180 SAHPSLMAKK VRTTSSCSQT PLCQVYGCNK DLSSSKDYHK RHKVCDVHSK TPKVIVNGNE 240 QRFCQQCSRF HLLAEFDDSK RSCRRRLAGH NERRRKPQFN IHSDRSRKLL QLYQGSELPW 300 TSLQNGTSFV YPDMLPGGIL FPERYEPVKQ IKFSERPPYS PQLAVPNTNE QLLTKSSLYQ 360 GNKKQHRLAI PLDTALTFQD SSGISHSSGA LSLLSAQSQS MPNHLSGIPM ARPLISQVSH 420 THLNLGQNFV KTSGTTPLGK YETKGFYTSG MNSMDGAQMR SLMVPDAGHA FELKVETDEV 480 SQESDFFKDK NCYSPEQGFT VDLIQLSSHL KRVEQQRNSI QPKQHTDDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 2e-52 | SBP family protein |