PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NF-YC | ||||||||
Protein Properties | Length: 143aa MW: 16319.7 Da PI: 9.0857 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 58.1 | 1.9e-18 | 6 | 94 | 10 | 97 |
NF-YC 10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 e++t+ + e+P+ r+kki+k ded++++++ea ++s++ elf+ l+ +s a e+kr+t+k d+ av+r + dfl+d p GAY44101.1 6 EEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLAEKSAEAAIEKKRKTIKLGDMRVAVKRHRpTSDFLLDSLP 94 689999999*****************************************************************9975389*****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MAEEAEEQNT ETTRPEFPVG RVKKIIKLDE DINKVTSEAL FIVSRSTELF LRFLAEKSAE 60 AAIEKKRKTI KLGDMRVAVK RHRPTSDFLL DSLPLPIQSL DRPATGKARS RPAVEKPLPV 120 GTRRIDRFFH KPENEVPVEI EDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 1e-38 | NF-YC family protein |