PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44004.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 503aa    MW: 56368.9 Da    PI: 7.2876
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS372.45.7e-1141315011374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetseknsseelaalklfsevsPilkfshlta 98 
                 lv++L++cAeav+ +d++ a+alL +l+ +a   g+++qR+a++f+++L+ rla  ++ + +  + p ++s   +se+  +l+lf+e++P ++f+h++a
  GAY44004.1 131 LVQQLIACAEAVACRDKAHASALLLELRVNALVFGTSFQRVASCFVQGLSDRLALVQPlGAVGVVGPAAKSMAITSERDESLSLFYEICPQIQFGHFVA 229
                 689***************************************************9444133444445555444499999999***************** PP

        GRAS  99 NqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                 N  Ilea+ege+ vH++D++++    +G QW +L+q+L +R+++ p +l+iTgvg+     +e+l e+g+ L+++A+ l+++fef + v+k+le+l+ +
  GAY44004.1 230 NASILEAFEGESLVHVVDLGMTlglpHGRQWHSLMQSLVNRSGKVPkRLKITGVGN----CSERLGEIGDELKRYADGLKLSFEFLA-VEKSLETLQAK 323
                 ******************99873333678*************77666*********....9**************************.7********** PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                 +++v+ gE+l+ n++l+lh +++es    +   +vL+ + +lsPkvv +veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ + +r+k+E+++++
  GAY44004.1 324 DINVEDGEVLVMNSILELHCVVKESRGALN---SVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFA 419
                 **********************88877777...8***************************************************************** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +ei+n+v+ceg +r+erhe++ +Wr+r+++aGF++vp++  + +qak  lrkv+  +gy++ ee+g+lvlgWk++p++++S+W+
  GAY44004.1 420 EEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIK--MLMQAKQWLRKVQtCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
                 *************************************96..789***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    
MAPDFQWRHG LCLDDKNNEV MGLDLNYSAT ACYRCFNLST LANHSCTWST SDETRNHKRI  60
KKTSMIDESS GSSSRLCNSL NSLPRLQFRD HVWVYTQRYL AIEAMEEAAL AMMAGKDTEV  120
KEEGNGDGMK LVQQLIACAE AVACRDKAHA SALLLELRVN ALVFGTSFQR VASCFVQGLS  180
DRLALVQPLG AVGVVGPAAK SMAITSERDE SLSLFYEICP QIQFGHFVAN ASILEAFEGE  240
SLVHVVDLGM TLGLPHGRQW HSLMQSLVNR SGKVPKRLKI TGVGNCSERL GEIGDELKRY  300
ADGLKLSFEF LAVEKSLETL QAKDINVEDG EVLVMNSILE LHCVVKESRG ALNSVLQRLH  360
QLSPKVVMLV EQDSSHNGPF FLGRFMEALH YYSAIFDSLD AMLPKYDTKR AKIEQFYFAE  420
EIKNIVSCEG PARVERHERV DQWRRRMSRA GFQSVPIKML MQAKQWLRKV QTCEGYTIIE  480
EKGCLVLGWK SKPIIAASCW KCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.18e-78GRAS family protein