PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY43944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | TCP | ||||||||
Protein Properties | Length: 241aa MW: 27812.3 Da PI: 10.0346 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 122.9 | 3.7e-38 | 30 | 133 | 2 | 135 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskks 100 ++k+drhski+T++g RdRRvRls+e+a++fFdLqd+LGfdk+s+t+eWL++++ +aikel +++ + + GAY43944.1 30 PVKRDRHSKICTAQGFRDRRVRLSIEIARKFFDLQDMLGFDKASQTLEWLFNKSRKAIKELIELKRPCN------------------------------ 98 579*************************************************************55555.............................. PP TCP 101 qksaasalnlakesrakarararertrekmriknk 135 +s++ + +lak+sr +ararar+rtrekm++k GAY43944.1 99 GTSKQLMEKLAKKSRDQARARARQRTREKMFKKFA 133 455667799*********************99865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MAFTGNASAV VNREHFDHPS SFIRNEKPVP VKRDRHSKIC TAQGFRDRRV RLSIEIARKF 60 FDLQDMLGFD KASQTLEWLF NKSRKAIKEL IELKRPCNGT SKQLMEKLAK KSRDQARARA 120 RQRTREKMFK KFADTTPQIS TQIKACQESS SYVVSHDQVQ EPCSSTLACQ TQDNQAPTDR 180 NQNPSSNFAH DQQNLEISKD TISCNTSNYN FNLPQNWDIV SAMPHQYTVC RAITKHESLN 240 W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 4e-33 | TCP family protein |