PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY43942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 391aa MW: 44452.6 Da PI: 9.7052 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 5.9e-17 | 4 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd +l+ +vkq+G++ W++I+++mg ++R +k+c +rw +yl GAY43942.1 4 RQRWQPEEDAILKAYVKQYGPKEWNLISQRMGktLNRDPKSCLERWKNYL 53 89**********************************************97 PP | |||||||
2 | Myb_DNA-binding | 33.9 | 7.4e-11 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ ++eE+ l + + +++G++ Wk+Ia++++ gRt+k + +w + GAY43942.1 59 KGSLSPEEQSLVISLQAKYGNK-WKKIASEVP-GRTAKRLGKWWEVF 103 57789*****************.*********.*****999999766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence |
MKERQRWQPE EDAILKAYVK QYGPKEWNLI SQRMGKTLNR DPKSCLERWK NYLKPGIKKG 60 SLSPEEQSLV ISLQAKYGNK WKKIASEVPG RTAKRLGKWW EVFKEKQLKQ LHKEKQRREY 120 SDQQQEGNVP VVGLGSGSCS SPEKVAQGRY DHILETFAEK YVQPKLFAMQ ALNLNLNPVP 180 ANAIMPNLPL GGADPEPVLS LGSGPTWMNN HNHNHHTSGS SLTSSTSSTT TASPSVSLSL 240 SPSEPGIELG DMNPVARFMP GPQVGTLVQY CKELEEGRQS WVQHKKEATW RLSRLEQQLE 300 SEKARKRREK MDEIETKIRA LREEELSHLG RIESEYKEQL SALQRDAESK EAKLMEAWCS 360 RHVKLLKLVE QIGVHQSSTS HGFCVVPKDM H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 305 | 310 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 6e-58 | MYB family protein |