PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY43708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GeBP | ||||||||
Protein Properties | Length: 241aa MW: 28288.2 Da PI: 9.1929 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 81.1 | 1.6e-25 | 47 | 141 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +f+r+w+e Dei +LqGl+d a+ g d+ fye +++ +s +sk ql+eK+rrL+kKf+ ++++++g ++s + hd++ fels+k+W GAY43708.1 47 KFHRIWTEPDEIRFLQGLLDS-ASLGLTFPRDLPIFYERFSNAMSQPYSKYQLSEKLRRLRKKFRVTSSRISRGLNVSHLNFHDRNLFELSMKLWS 141 699*****************8.889999999****************************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MDSLKPSSAS KSKLPIKRKS EQSHNQDQSI TTVDFTDPTN INPPPFKFHR IWTEPDEIRF 60 LQGLLDSASL GLTFPRDLPI FYERFSNAMS QPYSKYQLSE KLRRLRKKFR VTSSRISRGL 120 NVSHLNFHDR NLFELSMKLW SPECLPTSPF GKISVCGGNV DVDFSSCGKK EKETIEEVAV 180 ARSVLDVFDE CLKEVRMIVA NQPKEEREKD FDRRWREQRF AEFDVLTRRL RLVLDDYFNW 240 Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 2e-17 | GeBP family protein |