PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43544.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 317aa    MW: 34962.2 Da    PI: 7.8371
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00031426123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                +kC+ C++sFs+   L  H++ H
  GAY43544.1  4 HKCKLCTRSFSNGRALGGHMKAH 26
                79******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEKHKCKLCT RSFSNGRALG GHMKAHLAAH PLPPKTNQQQ QPSDSTESAS TSSSSSGEGV  60
EVKGKSPEVA EEKSLGYGLR NNPKKSFRFA DPEFSFAVDS GSVVVQDRES ETESRNPTRR  120
RSKRNRKLFT AHQDHHQKPM LKKPNFLESP AEPEPVSSVS DTSPEEDVAM CLMMLSRDVW  180
MRNNDEAQDH KIVEMVEESE EIKLTRGKHR CEKCKKAFRS YHALGGHKKV CETNINAGTK  240
VAADEKIFEC PFCYKVFGSG QALGGHKRSH LLANSSSTAA AAAVVATHPA VKFENNLIDL  300
NLPAPLEEDD FSVVSDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.13e-30C2H2 family protein