PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43370.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 303aa MW: 33961.1 Da PI: 6.6305

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.1e-07	252	285	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + GAY43370.1 252 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 285 469*****************************87 PP
2	ELK	25.4	3.2e-09	206	227	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ GAY43370.1 206 ELKIELKQGFKSRIEDVREEIL 227 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MQEPSLGVMG SSSSGGGGGG GDVSGHHDQT ATVQLIKAEI ASHPLYEQLL AAHVSCLRVA 60 TPIDQLPLID AQLAQSHHVL RSYGSLQQAN NNNNHSLSPH ERQELDNFLA QYLIVLCTFK 120 EQLQQHVRVH AVEAVMGCRE IENTLQALTG VSLGEGTGAT MSDDEDDLHM DFSLDQSASD 180 SHDLMGFGPL LPTETERSLM ERVRQELKIE LKQGFKSRIE DVREEILRKR RAGKLPGDTT 240 SVLKTWWQQH SKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHSN SQSVTSLKSK 300 RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	283	303	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-162	TALE family protein