PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY43152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | B3 | ||||||||
Protein Properties | Length: 187aa MW: 21105.3 Da PI: 8.3011 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.5 | 8.9e-12 | 104 | 164 | 41 | 98 |
TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS B3 41 esgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 +g++We+ + +k+ +++ Wk F+ +n+Lk+gD +vF+l+ r ++ +++v+++r GAY43152.1 104 YKGKEWEMVYLGedfQKRN--KRFGSEWKTFAIDNKLKVGDACVFELMeCRnDCLKFRVQILR 164 589*******667444444..45899********************88767799999999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
PLLVLSRGLT GSRLRTEKAM IGAVGSCSGK GVEDAQLKDP QFQTASKPTV IEVQGDEFWP 60 LSGKPYFNAI ISKSQLKPMN LMQYSIQRTL EILPSKTIPA FLVYKGKEWE MVYLGEDFQK 120 RNKRFGSEWK TFAIDNKLKV GDACVFELME CRNDCLKFRV QILRGDIPSK FEDNTNGENE 180 DTTIIVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 5e-06 | B3 family protein |