PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43069.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 329aa    MW: 36909 Da    PI: 9.6746
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.13.3e-3177133360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                   +rY+eClkNhAa +Gg+ +DGCgEfmps g+egt +alkCaAC+CHRnFHR+e + e
   GAY43069.1  77 VIRYRECLKNHAACIGGNIFDGCGEFMPS-GDEGTLEALKCAACECHRNFHRKEIDGE 133
                  589*************************9.999********************98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MEIKQENETK TPRRDGNNDN GTAVYSFNTH QTLDHNLQRQ QQQQQARSPN PDRVTSVIGA  60
AIAPISAGSN SKPPINVIRY RECLKNHAAC IGGNIFDGCG EFMPSGDEGT LEALKCAACE  120
CHRNFHRKEI DGETAQLIST GRRSAVMLNP LQLPPPLPSP TMMHHHHHHQ KYSISRHTMS  180
PSSAIVAPMN VAFGGGISES SSEDLSNVLH SEGVLQHQPP AAPPPPPPFV LSKKRFRTKF  240
TQEQKDKMME FAEKVGWRFQ KQDDDQVDKF CAEVGVKRHV FKVWMHNNKN NIVKNKQEPA  300
ADPVGRKMKQ CTLKMRMKRA IESLKVWVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.13e-58ZF-HD family protein