PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42931.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

E2F/DP

Protein Properties

Length: 408aa MW: 45948.1 Da PI: 5.3836

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85	6e-27	137	202	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++g+++ln a+ L +v ++RRiYDi+NVLe+++liek++kn+irwkg GAY42931.1 137 RYDSSLGLLTRKFINLIQEAKDGTLDLNRTAEVL---EV--QKRRIYDITNVLEGIRLIEKTSKNHIRWKG 202 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MQEKNRDNKT SKEKVTTSLG ANRNYHSLLG KIPLSSNQNN TLNVNSNSTD IDICNKIEDT 60 HSAFSRLELK QTNELANHAA QNIARRDKVV NAPSLEPESC ASGKSNRKLK GLKSTKSGTQ 120 GSNADAPNGL NLSNGCRYDS SLGLLTRKFI NLIQEAKDGT LDLNRTAEVL EVQKRRIYDI 180 TNVLEGIRLI EKTSKNHIRW KGSDSLGTSK LDDQVARLKA EIESLHAEEC RIDDSIREKQ 240 ELIRTLEENE NHQKYMFLTE EDIASLPCFQ NQTLIAIKAP QASYIEVPDP DEDISFLKRQ 300 YKMIIRSTTG PIDVYLLSKY QSEGKDITLQ QANSANPSTW NYEPCGVPNF RLSLEHEDNQ 360 KRSSDTFSLM SSEAASGIQK IVPSDCDIDD DYWFRSDPEV SITDLWNN

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MQEKNRDNKT SKEKVTTSLG ANRNYHSLLG KIPLSSNQNN TLNVNSNSTD IDICNKIEDT  60
HSAFSRLELK QTNELANHAA QNIARRDKVV NAPSLEPESC ASGKSNRKLK GLKSTKSGTQ  120
GSNADAPNGL NLSNGCRYDS SLGLLTRKFI NLIQEAKDGT LDLNRTAEVL EVQKRRIYDI  180
TNVLEGIRLI EKTSKNHIRW KGSDSLGTSK LDDQVARLKA EIESLHAEEC RIDDSIREKQ  240
ELIRTLEENE NHQKYMFLTE EDIASLPCFQ NQTLIAIKAP QASYIEVPDP DEDISFLKRQ  300
YKMIIRSTTG PIDVYLLSKY QSEGKDITLQ QANSANPSTW NYEPCGVPNF RLSLEHEDNQ  360
KRSSDTFSLM SSEAASGIQK IVPSDCDIDD DYWFRSDPEV SITDLWNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	1e-110	E2F/DP family protein