PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42927.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 309aa    MW: 34357.2 Da    PI: 10.2108
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023195217223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  C+ Cg++F+  ++L+ H+ + H
  GAY42927.1 195 ACSQCGEVFPKIESLELHQAVrH 217
                 6******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MKERAGYVTV LLNLLAFLFM ALVTFLPEPT ESKKQPAAPP PPSKRNRKQQ KVQKQKEKQP  60
SSWDQIKNLL TCKQIEGSKV HDPAAKNVNG YSRLGSSCSS ICSFKDVVHG NTKVVHRADN  120
SPESSTLGQE TGLLSRKAVN GSSTRSASVS ARSNGCRTYS SSSRGMQFRK LSGCYECHTI  180
IDPSRFPSPR TTICACSQCG EVFPKIESLE LHQAVRHAVS ELGPEDSSRN IVEIIFKSSW  240
LKQNSPMCKI ERILKVHNTQ RTIQRFEDCR DAVKTRALNS TRKNPRCAAD GNELLRFHCT  300
TLSCNLGSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-118C2H2 family protein