PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42820.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Dof
Protein Properties Length: 262aa    MW: 26527.2 Da    PI: 8.4855
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1208.7e-383392261
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                ++++l+cprC+stntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+
  GAY42820.1 33 EQEQLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPIGGGTRKNAKR 92
                57899***************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MPTDSNENNN NNNNNNSSSS SSKRVTAKNP AAEQEQLPCP RCESTNTKFC YYNNYNFSQP  60
RHFCKSCRRY WTHGGTLRDI PIGGGTRKNA KRCRTIPSST CAATNTMSIT PGVAVGSAHQ  120
DYPLHATPVL VPFQGGSAPL KAANMNGGYG VCGNGTGAGG FASLLSPQGP GFLALGGFGL  180
GLGSGFVGDV GLAGLGRGAW GLAGVSDAGA AAANGGGGGG SSGIGNTWQF ESGEATTTSG  240
FGTADCFSWP DLAISTPGNG LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.13e-44Dof family protein