PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 21962.2 Da PI: 8.6623 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.5 | 1e-20 | 68 | 118 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp++ ng +r++lg+++t+e+Aa a+++a+ +++g GAY41833.1 68 YRGVRRRP-WGKFAAEIRDPNKkNG--ARVWLGTYDTPEGAALAYDRAAFNMRG 118 9*******.**********866566..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MYTENSVSDS DFAILESIRQ YLLNDDFDNV PSETSISVND DPLINSPTNS SFRTRGATTH 60 ESHVRVFYRG VRRRPWGKFA AEIRDPNKKN GARVWLGTYD TPEGAALAYD RAAFNMRGSK 120 AKLNFPHLIG SNVAPPLRVT KKRGSSSSSN YTLHLQSESP NSKRRKDIHS SSAANNEAGS 180 LCFASDDDDF CIWFYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 6e-41 | ERF family protein |