PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41751.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 497aa    MW: 54638.4 Da    PI: 5.5097
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3466.4e-1061094901374
        GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar.svselykalppsetsekn....sseelaalklfsevsPil 91 
                 lv+lL+++Aea++  +++  laq +L rl+el+sp++ ++m+Rlaayft AL+  l +  + +  ++ ++s+ ++++    ++++laa++l++++sP++
  GAY41751.1 109 LVHLLMAAAEALTGVNKSreLAQVILVRLKELVSPNDgSNMERLAAYFTDALQGLLEGaGGVHGNNKHNTSNGPHHRddhhHTDVLAAFQLLQDMSPYV 207
                 68***********85554449***********8887669*****************994222222222222222111346699**************** PP

        GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                 kf+h+taNqaIleav++++rvHi+D+di++G+QW++L+qaL sR++gpp  +lRiT++++  sg  s  +++etg+rL  fA+++g pf+f+    ++ 
  GAY41751.1 208 KFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPapHLRITALSRGGSGrrSISTVQETGRRLVAFAASIGQPFSFHQCRLDSD 306
                 *********************************************776555*********888899999************************9999** PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerik 284
                 e+++ ++L++ +gEal++n++l+l ++  +    ++ + ++L+  k+l+Pk+v++ve+e+   +++ F+ rf+++l++ysa++dslea++p +s++r+ 
  GAY41751.1 307 ETFKASALKLVRGEALIINCMLHLPHFSYR---APDSIASFLSGAKTLNPKLVTLVEEETGPiGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARAL 402
                 *************************99844...4444569*******************9888************************************ PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                 vEr++lg++i+  +a   +     +e++ +W ++l+ +GFkpv++s  + +qaklll  ++ dgyrvee  ++ lvlgWk+r+L+s+S+W+
  GAY41751.1 403 VERVFLGPRISGSLARIYRT--CGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN-DGYRVEELaNNRLVLGWKSRRLLSASVWT 490
                 ***************99876..778889*********************************.******97588999**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MAMAMDFDDI LHLDFSGYSS TTTTTTTGDD YACDWNDWSP VVDWEALSGG QDDFHDLIES  60
MMDDSGLNPN ARVANIAHEP CNSVSTETSS SSMAVDEETN GEDFKGLRLV HLLMAAAEAL  120
TGVNKSRELA QVILVRLKEL VSPNDGSNME RLAAYFTDAL QGLLEGAGGV HGNNKHNTSN  180
GPHHRDDHHH TDVLAAFQLL QDMSPYVKFG HFTANQAILE AVANDRRVHI VDYDIMEGIQ  240
WASLMQALVS RKDGPPAPHL RITALSRGGS GRRSISTVQE TGRRLVAFAA SIGQPFSFHQ  300
CRLDSDETFK ASALKLVRGE ALIINCMLHL PHFSYRAPDS IASFLSGAKT LNPKLVTLVE  360
EETGPIGDGG FVSRFMDSLH HYSAVYDSLE AGFPMQSRAR ALVERVFLGP RISGSLARIY  420
RTCGEEEVYS WGDWLGVVGF KPVNISFANH CQAKLLLGLF NDGYRVEELA NNRLVLGWKS  480
RRLLSASVWT SSFDSNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-175GRAS family protein