PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41590.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 255aa    MW: 28608.7 Da    PI: 10.0963
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.26.9e-06109128120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C+ C k+F+r  nL+ H+
  GAY41590.1 109 FSCHVCFKTFNRYNNLQMHM 128
                 89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
METQNLSCHS SNVFAISSTN HIQIEPLNLF PSVTYNSNGG STEPQPSLNQ NRKARNEEKD  60
DVAVALHIGL PNYSHSSTNP SAKGNANVAA AKQYWIPTPE QILIGFTHFS CHVCFKTFNR  120
YNNLQMHMWG HGSQYRKGPE SLKGTQPRAI LGIPCYCCAE GCKNSINHPK AKPLKDFRTL  180
QTHYKRKHGL KPFMCRKCGK FLAVKGDWRT HEKNCGKRWL CVCGSDFKHK RSLKDHIKAL  240
ASANGPFSRP LLTAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-114C2H2 family protein